bioconductor-gosemsim

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Implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for estimating GO semantic similarities. Support many species, including Anopheles, Arabidopsis, Bovine, Canine, Chicken, Chimp, Coelicolor, E coli strain K12 and Sakai, Fly, Gondii, Human, Malaria, Mouse, Pig, Rhesus, Rat, Worm, Xenopus, Yeast, and Zebrafish.

Home http://bioconductor.org/packages/release/bioc/html/GOSemSim.html
Versions 1.28.2, 1.29.0, 1.30.3, 2.2.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-gosemsim

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gosemsim

and update with:

conda update bioconductor-gosemsim

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-gosemsim.