recipe bioconductor-gostats

Tools for manipulating GO and microarrays

Homepage

https://bioconductor.org/packages/3.11/bioc/html/GOstats.html

License

Artistic-2.0

Recipe

/bioconductor-gostats/meta.yaml

Links

biotools: gostats

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

package bioconductor-gostats

Versions

2.54.0-0, 2.52.0-0, 2.50.0-1, 2.48.0-0, 2.46.0-0, 2.44.0-0, 2.42.0-0, 2.38.1-1, 2.38.1-0, 2.36.0-0

Depends

• bioconductor-annotate >=1.66.0,<1.67.0

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-annotationforge >=1.30.0,<1.31.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-category >=2.54.0,<2.55.0

• bioconductor-go.db >=3.11.0,<3.12.0

• bioconductor-graph >=1.66.0,<1.67.0

• bioconductor-rbgl >=1.64.0,<1.65.0

• bioconductor-rgraphviz >=2.32.0,<2.33.0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-systempiper

• bioconductor-reportingtools

• bioconductor-categorycompare

• bioconductor-ideal

• bioconductor-rdavidwebservice

• bioconductor-sctensor

• bioconductor-migsa

• bioconductor-pcaexplorer

• bioconductor-affycoretools

• bioconductor-plogo2

• bioconductor-attract

• bioconductor-gmicr

• bioconductor-mineica

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gostats

and update with:

conda update bioconductor-gostats

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gostats:<tag>

(see bioconductor-gostats/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gostats/README.html)