recipe bioconductor-gostats

Tools for manipulating GO and microarrays

Homepage

https://bioconductor.org/packages/3.14/bioc/html/GOstats.html

License

Artistic-2.0

Recipe

/bioconductor-gostats/meta.yaml

Links

biotools: gostats

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

package bioconductor-gostats

Versions

2.60.0-0,  2.58.0-0,  2.56.0-1,  2.56.0-0,  2.54.0-0,  2.52.0-0,  2.50.0-1,  2.48.0-0,  2.46.0-0, 

2.60.0-0,  2.58.0-0,  2.56.0-1,  2.56.0-0,  2.54.0-0,  2.52.0-0,  2.50.0-1,  2.48.0-0,  2.46.0-0,  2.44.0-0,  2.42.0-0,  2.38.1-1,  2.38.1-0,  2.36.0-0

Depends

• bioconductor-annotate >=1.72.0,<1.73.0

• bioconductor-annotationdbi >=1.56.0,<1.57.0

• bioconductor-annotationforge >=1.36.0,<1.37.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-category >=2.60.0,<2.61.0

• bioconductor-go.db >=3.14.0,<3.15.0

• bioconductor-graph >=1.72.0,<1.73.0

• bioconductor-rbgl >=1.70.0,<1.71.0

• bioconductor-rgraphviz >=2.38.0,<2.39.0

• r-base >=4.1,<4.2.0a0

Required By

• bioconductor-reportingtools

• bioconductor-affycoretools

• bioconductor-migsa

• bioconductor-pcaexplorer

• bioconductor-ideal

• bioconductor-sctensor

• bioconductor-plogo2

• bioconductor-categorycompare

• bioconductor-gmicr

• bioconductor-mineica

• bioconductor-attract

• bioconductor-mirlab

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gostats

and update with:

conda update bioconductor-gostats

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gostats:<tag>

(see bioconductor-gostats/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gostats/README.html)