recipe bioconductor-gostats

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/GOstats.html

License

Artistic-2.0

Recipe

/bioconductor-gostats/meta.yaml

Links

biotools: gostats

package bioconductor-gostats

Versions

2.48.0-0, 2.46.0-0, 2.44.0-0, 2.42.0-0, 2.38.1-1, 2.38.1-0, 2.36.0-0

Depends

• bioconductor-annotate >=1.60.0,<1.61.0

• bioconductor-annotationdbi >=1.44.0,<1.45.0

• bioconductor-annotationforge >=1.24.0,<1.25.0

• bioconductor-biobase >=2.42.0,<2.43.0

• bioconductor-category >=2.48.0,<2.49.0

• bioconductor-go.db >=3.7.0,<3.8.0

• bioconductor-graph >=1.60.0,<1.61.0

• bioconductor-rbgl >=1.58.0,<1.59.0

• bioconductor-rgraphviz >=2.26.0,<2.27.0

• r-base >=3.5.1,<3.5.2.0a0

Required By

• bioconductor-pcaexplorer

• bioconductor-reportingtools

• bioconductor-mvgst

• bioconductor-systempiper

• bioconductor-migsa

• bioconductor-mineica

• bioconductor-categorycompare

• bioconductor-affycoretools

• bioconductor-attract

• bioconductor-ideal

• bioconductor-rdavidwebservice

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gostats

and update with:

conda update bioconductor-gostats

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gostats:<tag>

(see bioconductor-gostats/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gostats/README.html)