recipe bioconductor-greylistchip

Identify regions of ChIP experiments with high signal in the input, that lead to spurious peaks during peak calling. Remove reads aligning to these regions prior to peak calling, for cleaner ChIP analysis.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/GreyListChIP.html

License

Artistic-2.0

Recipe

/bioconductor-greylistchip/meta.yaml

package bioconductor-greylistchip

(downloads) docker_bioconductor-greylistchip

Versions

1.14.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-greylistchip

and update with:

conda update bioconductor-greylistchip

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-greylistchip:<tag>

(see bioconductor-greylistchip/tags for valid values for <tag>)