-
recipe
bioconductor-gsalightning
Fast Permutation-based Gene Set Analysis
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/GSALightning.html
- License
GPL (>=2)
- Recipe
- Links
biotools: gsalightning, doi: 10.1093/bioinformatics/btw349
GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.
-
package
bioconductor-gsalightning
¶ -
- Versions
1.18.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-0
- Depends
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gsalightning
and update with:
conda update bioconductor-gsalightning
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gsalightning:<tag>
(see bioconductor-gsalightning/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gsalightning/README.html)