- recipe bioconductor-gse62944
GEO accession data GSE62944 as a SummarizedExperiment
- Homepage
https://bioconductor.org/packages/3.14/data/experiment/html/GSE62944.html
- License
Artistic-2.0
- Recipe
TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944](http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE62944). GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.
- package bioconductor-gse62944¶
-
- Versions
1.22.0-0
,1.20.0-0
,1.18.0-1
,1.18.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.10.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-geoquery
>=2.62.0,<2.63.0
curl
>=7.79.1,<8.0a0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gse62944
and update with:
conda update bioconductor-gse62944
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gse62944:<tag>
(see bioconductor-gse62944/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gse62944/README.html)