recipe bioconductor-gsealm

Linear Model Toolset for Gene Set Enrichment Analysis

Homepage

https://bioconductor.org/packages/3.11/bioc/html/GSEAlm.html

License

Artistic-2.0

Recipe

/bioconductor-gsealm/meta.yaml

Links

biotools: gsealm, doi: 10.1093/bioinformatics/btn465

Models and methods for fitting linear models to gene expression data, together with tools for computing and using various regression diagnostics.

package bioconductor-gsealm

Versions

1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-0,  1.40.0-0,  1.38.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-gcmap

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gsealm

and update with:

conda update bioconductor-gsealm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gsealm:<tag>

(see bioconductor-gsealm/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gsealm/README.html)