- recipe bioconductor-gsri
Gene Set Regulation Index
- Homepage
- License
GPL-3
- Recipe
- Links
biotools: gsri, doi: 10.1038/nmeth.3252
The GSRI package estimates the number of differentially expressed genes in gene sets, utilizing the concept of the Gene Set Regulation Index (GSRI).
- package bioconductor-gsri¶
-
- Versions
2.42.0-0
,2.40.0-0
,2.38.0-1
,2.38.0-0
,2.36.0-0
,2.34.0-0
,2.32.0-1
,2.30.0-0
,2.28.0-0
,2.42.0-0
,2.40.0-0
,2.38.0-1
,2.38.0-0
,2.36.0-0
,2.34.0-0
,2.32.0-1
,2.30.0-0
,2.28.0-0
,2.26.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-genefilter
>=1.76.0,<1.77.0
bioconductor-gseabase
>=1.56.0,<1.57.0
bioconductor-les
>=1.44.0,<1.45.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gsri
and update with:
conda update bioconductor-gsri
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gsri:<tag>
(see bioconductor-gsri/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gsri/README.html)