recipe bioconductor-gsvadata

Data employed in the vignette of the GSVA package

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/GSVAdata.html

License

GPL (>= 2)

Recipe

/bioconductor-gsvadata/meta.yaml

This package stores the data employed in the vignette of the GSVA package. These data belong to the following publications: Armstrong et al. Nat Genet 30:41-47, 2002; Cahoy et al. J Neurosci 28:264-278, 2008; Carrel and Willard, Nature, 434:400-404, 2005; Huang et al. PNAS, 104:9758-9763, 2007; Pickrell et al. Nature, 464:768-722, 2010; Skaletsky et al. Nature, 423:825-837; Verhaak et al. Cancer Cell 17:98-110, 2010

package bioconductor-gsvadata

Versions

1.24.0-0, 1.22.0-0, 1.20.0-1, 1.18.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-gseabase >=1.50.0,<1.51.0

• bioconductor-hgu95a.db >=3.2.0,<3.3.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-singlecelltk

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gsvadata

and update with:

conda update bioconductor-gsvadata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gsvadata:<tag>

(see bioconductor-gsvadata/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gsvadata/README.html)