recipe bioconductor-gtrellis

Genome Level Trellis Layout

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/gtrellis.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-gtrellis/meta.yaml

Links:

biotools: gtrellis

Genome level Trellis graph visualizes genomic data conditioned by genomic categories (e.g. chromosomes). For each genomic category, multiple dimensional data which are represented as tracks describe different features from different aspects. This package provides high flexibility to arrange genomic categories and to add self-defined graphics in the plot.

package bioconductor-gtrellis

Versions:

1.30.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.14.0-0, 

1.30.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.14.0-0,  1.12.1-0,  1.11.1-0

Depends:

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• r-base >=4.2,<4.3.0a0

• r-circlize >=0.4.8

• r-getoptlong

Required By:

• bioconductor-yapsa

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gtrellis

and update with:

conda update bioconductor-gtrellis

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gtrellis:<tag>

(see bioconductor-gtrellis/tags for valid values for <tag>)

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