- recipe bioconductor-hca
Exploring the Human Cell Atlas Data Coordinating Platform
- Homepage:
- License:
MIT + file LICENSE
- Recipe:
This package provides users with the ability to query the Human Cell Atlas data repository for single-cell experiment data. The `projects()`, `files()`, `samples()` and `bundles()` functions retrieve summary information on each of these indexes; corresponding `*_details()` are available for individual entries of each index. File-based resources can be downloaded using `files_download()`. Advanced use of the package allows the user to page through large result sets, and to flexibly query the 'list-of-lists' structure representing query responses.
- package bioconductor-hca¶
-
- Versions:
1.2.0-0
,1.0.0-0
- Depends:
bioconductor-biocfilecache
>=2.2.0,<2.3.0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-hca
and update with:
conda update bioconductor-hca
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-hca:<tag>
(see bioconductor-hca/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-hca/README.html)