recipe bioconductor-hellorangesdata

Provides the data that were used in the bedtools tutorial by Aaron Quinlan (http://quinlanlab.org/tutorials/bedtools/bedtools.html). Includes a subset of the DnaseI hypersensitivity data from “Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195.” The rest of the tracks were originally downloaded from the UCSC table browser. See the HelloRanges vignette for a port of the bedtools tutorial to R.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/HelloRangesData.html

License

GPL (>= 2)

Recipe

/bioconductor-hellorangesdata/meta.yaml

package bioconductor-hellorangesdata

(downloads) docker_bioconductor-hellorangesdata

Versions

1.10.0-1, 1.10.0-0, 1.8.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-hellorangesdata

and update with:

conda update bioconductor-hellorangesdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hellorangesdata:<tag>

(see bioconductor-hellorangesdata/tags for valid values for <tag>)