recipe bioconductor-hicdatahumanimr90

Human IMR90 Fibroblast HiC data from Dixon et al. 2012

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/HiCDataHumanIMR90.html

License:

GPL-3

Recipe:

/bioconductor-hicdatahumanimr90/meta.yaml

The HiC data from Human Fibroblast IMR90 cell line (HindIII restriction) was retrieved from the GEO website, accession number GSE35156 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35156). The raw reads were processed as explained in Dixon et al. (Nature 2012).

package bioconductor-hicdatahumanimr90

(downloads) docker_bioconductor-hicdatahumanimr90

Versions:
1.17.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.9.0-0,  1.8.0-0,  1.6.0-0, 

1.17.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.9.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-hicdatahumanimr90

and update with:

conda update bioconductor-hicdatahumanimr90

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hicdatahumanimr90:<tag>

(see bioconductor-hicdatahumanimr90/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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