- recipe bioconductor-hicdatahumanimr90
Human IMR90 Fibroblast HiC data from Dixon et al. 2012
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/HiCDataHumanIMR90.html
- License:
GPL-3
- Recipe:
The HiC data from Human Fibroblast IMR90 cell line (HindIII restriction) was retrieved from the GEO website, accession number GSE35156 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35156). The raw reads were processed as explained in Dixon et al. (Nature 2012).
- package bioconductor-hicdatahumanimr90¶
-
- Versions:
1.17.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.9.0-0
,1.8.0-0
,1.6.0-0
,1.17.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.9.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
- Depends:
bioconductor-data-packages
>=20221103
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-hicdatahumanimr90
and update with:
conda update bioconductor-hicdatahumanimr90
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-hicdatahumanimr90:<tag>
(see bioconductor-hicdatahumanimr90/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
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