- recipe bioconductor-hicontactsdata
HiContacts companion data package
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/HiContactsData.html
- License:
MIT + file LICENSE
- Recipe:
Provides a collection of Hi-C files (pairs and (m)cool). These datasets can be read into R and further investigated and visualized with the HiContacts package. Data includes yeast Hi-C data generated by the Koszul lab from the Pasteur Institute.
- package bioconductor-hicontactsdata¶
-
- Versions:
1.0.0-0
- Depends:
bioconductor-annotationhub
>=3.6.0,<3.7.0
bioconductor-biocfilecache
>=2.6.0,<2.7.0
bioconductor-data-packages
>=20221108
bioconductor-experimenthub
>=2.6.0,<2.7.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-hicontactsdata
and update with:
conda update bioconductor-hicontactsdata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-hicontactsdata:<tag>
(see bioconductor-hicontactsdata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-hicontactsdata/README.html)