recipe bioconductor-hiergwas

Asessing statistical significance in predictive GWA studies

Homepage

https://bioconductor.org/packages/3.10/bioc/html/hierGWAS.html

License

GPL-3

Recipe

/bioconductor-hiergwas/meta.yaml

Testing individual SNPs, as well as arbitrarily large groups of SNPs in GWA studies, using a joint model of all SNPs. The method controls the FWER, and provides an automatic, data-driven refinement of the SNP clusters to smaller groups or single markers.

package bioconductor-hiergwas

(downloads) docker_bioconductor-hiergwas

Versions

1.16.0-0, 1.14.0-1, 1.14.0-0, 1.12.0-1, 1.12.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-hiergwas

and update with:

conda update bioconductor-hiergwas

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hiergwas:<tag>

(see bioconductor-hiergwas/tags for valid values for <tag>)