recipe bioconductor-homo.sapiens

Contains the Homo.sapiens object to access data from several related annotation packages.

Homepage

https://bioconductor.org/packages/3.9/data/annotation/html/Homo.sapiens.html

License

Artistic-2.0

Recipe

/bioconductor-homo.sapiens/meta.yaml

package bioconductor-homo.sapiens

Versions

1.3.1-6, 1.3.1-4, 1.3.1-3, 1.3.1-1, 1.3.1-0

Depends

• bioconductor-annotationdbi >=1.46.0,<1.47.0

• bioconductor-genomicfeatures >=1.36.0,<1.37.0

• bioconductor-go.db >=3.8.0,<3.9.0

• bioconductor-org.hs.eg.db >=3.8.0,<3.9.0

• bioconductor-organismdbi >=1.26.0,<1.27.0

• bioconductor-txdb.hsapiens.ucsc.hg19.knowngene >=3.2.0,<3.3.0

• curl >=7.65.3,<8.0a0

• r-base >=3.6,<3.7.0a0

Required By

• bioconductor-gqtlstats

• bioconductor-gwascat

• bioconductor-chimera

• bioconductor-gpart

• bioconductor-mcsea

• bioconductor-erma

• bioconductor-compartmap

• bioconductor-ldblock

• bioconductor-ggtools

• bioconductor-appreci8r

• bioconductor-mtseeker

• bioconductor-yrimulti

• bioconductor-mtseekerdata

• bioconductor-gsreg

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-homo.sapiens

and update with:

conda update bioconductor-homo.sapiens

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-homo.sapiens:<tag>

(see bioconductor-homo.sapiens/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-homo.sapiens/README.html)