recipe bioconductor-htsfilter

Filter replicated high-throughput transcriptome sequencing data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/HTSFilter.html

License

Artistic-2.0

Recipe

/bioconductor-htsfilter/meta.yaml

This package implements a filtering procedure for replicated transcriptome sequencing data based on a global Jaccard similarity index in order to identify genes with low, constant levels of expression across one or more experimental conditions.

package bioconductor-htsfilter

(downloads) docker_bioconductor-htsfilter

Versions

1.34.0-01.32.0-01.28.0-01.26.0-01.24.0-11.22.1-01.22.0-01.20.0-01.18.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-htsfilter

and update with:

conda update bioconductor-htsfilter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-htsfilter:<tag>

(see bioconductor-htsfilter/tags for valid values for <tag>)

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