recipe bioconductor-humantranscriptomecompendium

Tools to work with a Compendium of 181000 human transcriptome sequencing studies

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/HumanTranscriptomeCompendium.html

License:

Artistic-2.0

Recipe:

/bioconductor-humantranscriptomecompendium/meta.yaml

Provide tools for working with a compendium of human transcriptome sequences (originally htxcomp).

package bioconductor-humantranscriptomecompendium

Versions:

1.14.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1

Depends:

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-ssrch >=1.14.0,<1.15.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-shiny

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-humantranscriptomecompendium

and update with:

conda update bioconductor-humantranscriptomecompendium

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-humantranscriptomecompendium:<tag>

(see bioconductor-humantranscriptomecompendium/tags for valid values for <tag>)

Download stats

Link to this page

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