recipe bioconductor-imas

Integrative analysis of Multi-omics data for Alternative Splicing

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/IMAS.html

License:

GPL-2

Recipe:

/bioconductor-imas/meta.yaml

Integrative analysis of Multi-omics data for Alternative splicing.

package bioconductor-imas

Versions:

1.22.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.6.0-0, 

1.22.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.6.0-0,  1.4.0-0,  1.2.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-biocparallel >=1.32.0,<1.33.0

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicalignments >=1.34.0,<1.35.0

• bioconductor-genomicfeatures >=1.50.0,<1.51.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-ivas >=2.18.0,<2.19.0

• bioconductor-rsamtools >=2.14.0,<2.15.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

• r-doparallel

• r-foreach

• r-ggfortify

• r-ggplot2

• r-gridextra

• r-lattice

• r-lme4

• r-matrix

• r-survival

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-imas

and update with:

conda update bioconductor-imas

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-imas:<tag>

(see bioconductor-imas/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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