recipe bioconductor-intansv

Integrative analysis of structural variations

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/intansv.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-intansv/meta.yaml

This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.

package bioconductor-intansv

Versions:

1.38.0-0,  1.34.0-0,  1.32.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-0,  1.24.0-1,  1.22.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-ggbio >=1.46.0,<1.47.0

• bioconductor-iranges >=2.32.0,<2.33.0

• r-base >=4.2,<4.3.0a0

• r-plyr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-intansv

and update with:

conda update bioconductor-intansv

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-intansv:<tag>

(see bioconductor-intansv/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-intansv/README.html)