- recipe bioconductor-isocorrector
Correction for natural isotope abundance and tracer purity in MS and MS/MS data from stable isotope labeling experiments
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/IsoCorrectoR.html
- License:
GPL-3
- Recipe:
IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O…), as well as ultra-high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously). See the Bioconductor package IsoCorrectoRGUI for a graphical user interface to IsoCorrectoR. NOTE: With R version 4.0.0, writing correction results to Excel files may currently not work on Windows. However, writing results to csv works as before.
- package bioconductor-isocorrector¶
-
- Versions:
1.16.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.8.0-0
,1.6.0-0
,1.4.0-0
,1.2.1-0
,1.2.0-0
,1.16.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.8.0-0
,1.6.0-0
,1.4.0-0
,1.2.1-0
,1.2.0-0
,1.0.5-0
- Depends:
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-isocorrector
and update with:
conda update bioconductor-isocorrector
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-isocorrector:<tag>
(see bioconductor-isocorrector/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-isocorrector/README.html)