recipe bioconductor-kissde

Retrieves condition-specific variants in RNA-seq data (SNVs, alternative-splicings, indels). It has been developed as a post-treatment of ‘KisSplice’ but can also be used with user’s own data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/kissDE.html

License

GPL (>= 2)

Recipe

/bioconductor-kissde/meta.yaml

package bioconductor-kissde

(downloads) docker_bioconductor-kissde

Versions

1.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-kissde

and update with:

conda update bioconductor-kissde

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-kissde:<tag>

(see bioconductor-kissde/tags for valid values for <tag>)