recipe bioconductor-leebamviews

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/leeBamViews.html

License

Artistic 2.0

Recipe

/bioconductor-leebamviews/meta.yaml

data from PMID 19096707; prototype for managing multiple NGS samples

package bioconductor-leebamviews

Versions

1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-bsgenome >=1.62.0,<1.63.0

• bioconductor-genomicalignments >=1.30.0,<1.31.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-rsamtools >=2.10.0,<2.11.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-leebamviews

and update with:

conda update bioconductor-leebamviews

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-leebamviews:<tag>

(see bioconductor-leebamviews/tags for valid values for <tag>)

Download stats

Link to this page

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