recipe bioconductor-liquidassociation

LiquidAssociation

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/LiquidAssociation.html

License:

GPL (>=3)

Recipe:

/bioconductor-liquidassociation/meta.yaml

Links:

biotools: liquidassociation, doi: 10.1038/nmeth.3252

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

package bioconductor-liquidassociation

Versions:

1.52.0-0,  1.48.0-0,  1.46.0-0,  1.44.0-1,  1.44.0-0,  1.42.0-0,  1.40.0-1,  1.38.0-1,  1.36.0-0, 

1.52.0-0,  1.48.0-0,  1.46.0-0,  1.44.0-1,  1.44.0-0,  1.42.0-0,  1.40.0-1,  1.38.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-org.sc.sgd.db >=3.16.0,<3.17.0

• bioconductor-yeastcc >=1.38.0,<1.39.0

• r-base >=4.2,<4.3.0a0

• r-geepack

Required By:

• bioconductor-fastliquidassociation

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-liquidassociation

and update with:

conda update bioconductor-liquidassociation

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-liquidassociation:<tag>

(see bioconductor-liquidassociation/tags for valid values for <tag>)

Download stats

Link to this page

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