recipe bioconductor-loci2path

Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLs

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/loci2path.html

License:

Artistic-2.0

Recipe:

/bioconductor-loci2path/meta.yaml

loci2path performs statistics-rigorous enrichment analysis of eQTLs in genomic regions of interest. Using eQTL collections provided by the Genotype-Tissue Expression (GTEx) project and pathway collections from MSigDB.

package bioconductor-loci2path

(downloads) docker_bioconductor-loci2path

Versions:
1.18.0-01.14.0-01.12.0-01.10.0-11.10.0-01.8.0-01.6.0-01.4.0-11.2.0-1

1.18.0-01.14.0-01.12.0-01.10.0-11.10.0-01.8.0-01.6.0-01.4.0-11.2.0-11.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-loci2path

and update with:

conda update bioconductor-loci2path

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-loci2path:<tag>

(see bioconductor-loci2path/tags for valid values for <tag>)

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