recipe bioconductor-lola

Provides functions for testing overlap of sets of genomic regions with public and custom region set (genomic ranges) databases. This makes it possible to do automated enrichment analysis for genomic region sets, thus facilitating interpretation of functional genomics and epigenomics data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/LOLA.html

License

GPL-3

Recipe

/bioconductor-lola/meta.yaml

Links

biotools: lola, doi: 10.1093/bioinformatics/btv612

package bioconductor-lola

(downloads) docker_bioconductor-lola

Versions

1.12.0-0, 1.10.0-0, 1.8.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-lola

and update with:

conda update bioconductor-lola

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-lola:<tag>

(see bioconductor-lola/tags for valid values for <tag>)