- recipe bioconductor-lpsymphony
Symphony integer linear programming solver in R
This package was derived from Rsymphony_0.1-17 from CRAN. These packages provide an R interface to SYMPHONY, an open-source linear programming solver written in C++. The main difference between this package and Rsymphony is that it includes the solver source code (SYMPHONY version 5.6), while Rsymphony expects to find header and library files on the users' system. Thus the intention of lpsymphony is to provide an easy to install interface to SYMPHONY. For Windows, precompiled DLLs are included in this package.
- package bioconductor-lpsymphony¶
- depends libblas:
- depends libgcc-ng:
- depends liblapack:
- depends libstdcxx-ng:
- depends r-base:
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install bioconductor-lpsymphony and update with:: mamba update bioconductor-lpsymphony
To create a new environment, run:
mamba create --name myenvname bioconductor-lpsymphony
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).
Alternatively, use the docker container:
docker pull quay.io/biocontainers/bioconductor-lpsymphony:<tag> (see `bioconductor-lpsymphony/tags`_ for valid values for ``<tag>``)