recipe bioconductor-lumi

The lumi package provides an integrated solution for the Illumina microarray data analysis. It includes functions of Illumina BeadStudio (GenomeStudio) data input, quality control, BeadArray-specific variance stabilization, normalization and gene annotation at the probe level. It also includes the functions of processing Illumina methylation microarrays, especially Illumina Infinium methylation microarrays.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/lumi.html

License

LGPL (>= 2)

Recipe

/bioconductor-lumi/meta.yaml

Links

biotools: lumi

package bioconductor-lumi

(downloads) docker_bioconductor-lumi

Versions

2.36.0-1, 2.34.0-0, 2.32.0-0, 2.30.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-lumi

and update with:

conda update bioconductor-lumi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-lumi:<tag>

(see bioconductor-lumi/tags for valid values for <tag>)