- recipe bioconductor-m6aboost
m6Aboost
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/m6Aboost.html
- License:
Artistic-2.0
- Recipe:
This package can help user to run the m6Aboost model on their own miCLIP2 data. The package includes functions to assign the read counts and get the features to run the m6Aboost model. The miCLIP2 data should be stored in a GRanges object. More details can be found in the vignette.
- package bioconductor-m6aboost¶
-
- Versions:
1.4.0-0
,1.0.0-0
- Depends:
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-bsgenome
>=1.66.0,<1.67.0
bioconductor-experimenthub
>=2.6.0,<2.7.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-rtracklayer
>=1.58.0,<1.59.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-m6aboost
and update with:
conda update bioconductor-m6aboost
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-m6aboost:<tag>
(see bioconductor-m6aboost/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-m6aboost/README.html)