recipe bioconductor-mafdb.1kgenomes.phase3.grch38

Minor allele frequency data from 1000 Genomes Phase 3 for GRCh38

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/MafDb.1Kgenomes.phase3.GRCh38.html

License:

Artistic-2.0

Recipe:

/bioconductor-mafdb.1kgenomes.phase3.grch38/meta.yaml

Store minor allele frequency data from the Phase 3 of the 1000 Genomes Project for the human genome version GRCh38.

package bioconductor-mafdb.1kgenomes.phase3.grch38

Versions:

3.10.0-7,  3.10.0-6,  3.10.0-5,  3.10.0-4,  3.10.0-3,  3.10.0-2,  3.10.0-1,  3.10.0-0,  3.7.0-2, 

3.10.0-7,  3.10.0-6,  3.10.0-5,  3.10.0-4,  3.10.0-3,  3.10.0-2,  3.10.0-1,  3.10.0-0,  3.7.0-2,  3.7.0-0

Depends:

• bioconductor-bsgenome >=1.66.0,<1.67.0

• bioconductor-data-packages >=20221103

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-genomicscores >=2.10.0,<2.11.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mafdb.1kgenomes.phase3.grch38

and update with:

conda update bioconductor-mafdb.1kgenomes.phase3.grch38

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mafdb.1kgenomes.phase3.grch38:<tag>

(see bioconductor-mafdb.1kgenomes.phase3.grch38/tags for valid values for <tag>)

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