recipe bioconductor-mafdb.gnomad.r2.1.grch38

Minor allele frequency data from gnomAD release 2.1 for GRCh38

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/MafDb.gnomAD.r2.1.GRCh38.html

License:

Artistic-2.0

Recipe:

/bioconductor-mafdb.gnomad.r2.1.grch38/meta.yaml

Store minor allele frequency data from the Genome Aggregation Database (gnomAD release 2.1) for the human genome version GRCh38.

package bioconductor-mafdb.gnomad.r2.1.grch38

Versions:

3.10.0-4,  3.10.0-3,  3.10.0-1,  3.10.0-0,  3.9.0-1

Depends:

• bioconductor-bsgenome >=1.62.0,<1.63.0

• bioconductor-genomeinfodb >=1.30.0,<1.31.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-genomicscores >=2.6.0,<2.7.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• curl

• r-base >=4.1,<4.2.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mafdb.gnomad.r2.1.grch38

and update with:

conda update bioconductor-mafdb.gnomad.r2.1.grch38

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mafdb.gnomad.r2.1.grch38:<tag>

(see bioconductor-mafdb.gnomad.r2.1.grch38/tags for valid values for <tag>)

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