recipe bioconductor-mafdb.gnomad.r2.1.hs37d5

Minor allele frequency data from gnomAD release 2.1 for hs37d5

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/MafDb.gnomAD.r2.1.hs37d5.html

License:

Artistic-2.0

Recipe:

/bioconductor-mafdb.gnomad.r2.1.hs37d5/meta.yaml

Store minor allele frequency data from the Genome Aggregation Database (gnomAD release 2.1) for the human genome version hs37d5.

package bioconductor-mafdb.gnomad.r2.1.hs37d5

Versions:

3.10.0-6,  3.10.0-5,  3.10.0-1,  3.10.0-0,  3.8.0-2,  3.8.0-0

Depends:

• bioconductor-bsgenome >=1.62.0,<1.63.0

• bioconductor-genomeinfodb >=1.30.0,<1.31.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-genomicscores >=2.6.0,<2.7.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• curl

• r-base >=4.1,<4.2.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mafdb.gnomad.r2.1.hs37d5

and update with:

conda update bioconductor-mafdb.gnomad.r2.1.hs37d5

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mafdb.gnomad.r2.1.hs37d5:<tag>

(see bioconductor-mafdb.gnomad.r2.1.hs37d5/tags for valid values for <tag>)

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