- recipe bioconductor-mafdb.topmed.freeze5.hg38
Minor allele frequency data from TOPMed for hg38
- Homepage:
https://bioconductor.org/packages/3.16/data/annotation/html/MafDb.TOPMed.freeze5.hg38.html
- License:
Artistic-2.0
- Recipe:
Store minor allele frequency data from NHLBI TOPMed for the human genome version hg38.
- package bioconductor-mafdb.topmed.freeze5.hg38¶
-
- Versions:
3.10.0-7
,3.10.0-6
,3.10.0-5
,3.10.0-4
,3.10.0-3
,3.10.0-2
,3.10.0-1
,3.10.0-0
,3.9.0-1
,3.10.0-7
,3.10.0-6
,3.10.0-5
,3.10.0-4
,3.10.0-3
,3.10.0-2
,3.10.0-1
,3.10.0-0
,3.9.0-1
,3.7.1-0
- Depends:
bioconductor-bsgenome
>=1.66.0,<1.67.0
bioconductor-data-packages
>=20221103
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-genomicscores
>=2.10.0,<2.11.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-mafdb.topmed.freeze5.hg38
and update with:
conda update bioconductor-mafdb.topmed.freeze5.hg38
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mafdb.topmed.freeze5.hg38:<tag>
(see bioconductor-mafdb.topmed.freeze5.hg38/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mafdb.topmed.freeze5.hg38/README.html)