recipe bioconductor-maser

Mapping Alternative Splicing Events to pRoteins

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/maser.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-maser/meta.yaml

This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.

package bioconductor-maser

Versions:

1.12.0-0,  1.10.0-0,  1.8.0-0,  1.7.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.0-0

Depends:

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• bioconductor-genomeinfodb >=1.30.0,<1.31.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-gviz >=1.38.0,<1.39.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-rtracklayer >=1.54.0,<1.55.0

• r-base >=4.1,<4.2.0a0

• r-data.table

• r-dplyr

• r-dt

• r-ggplot2

• r-reshape2

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-maser

and update with:

conda update bioconductor-maser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-maser:<tag>

(see bioconductor-maser/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-maser/README.html)