recipe bioconductor-maser

Mapping Alternative Splicing Events to pRoteins

Homepage

https://bioconductor.org/packages/3.12/bioc/html/maser.html

License

MIT + file LICENSE

Recipe

/bioconductor-maser/meta.yaml

This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.

package bioconductor-maser

Versions

1.7.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.0-0

Depends

• bioconductor-biocgenerics >=0.36.0,<0.37.0

• bioconductor-genomeinfodb >=1.26.0,<1.27.0

• bioconductor-genomicranges >=1.42.0,<1.43.0

• bioconductor-gviz >=1.34.0,<1.35.0

• bioconductor-iranges >=2.24.0,<2.25.0

• bioconductor-rtracklayer >=1.50.0,<1.51.0

• r-base >=4.0,<4.1.0a0

• r-data.table

• r-dplyr

• r-dt

• r-ggplot2

• r-reshape2

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-maser

and update with:

conda update bioconductor-maser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-maser:<tag>

(see bioconductor-maser/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-maser/README.html)