recipe bioconductor-maser

This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/maser.html

License

MIT + file LICENSE

Recipe

/bioconductor-maser/meta.yaml

package bioconductor-maser

Versions

1.2.0-1, 1.0.0-0

Depends

• bioconductor-biocgenerics >=0.30.0,<0.31.0

• bioconductor-genomeinfodb >=1.20.0,<1.21.0

• bioconductor-genomicranges >=1.36.0,<1.37.0

• bioconductor-gviz >=1.28.0,<1.29.0

• bioconductor-iranges >=2.18.0,<2.19.0

• bioconductor-rtracklayer >=1.44.0,<1.45.0

• r-base >=3.6,<3.7.0a0

• r-data.table

• r-dplyr

• r-dt

• r-ggplot2

• r-reshape2

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-maser

and update with:

conda update bioconductor-maser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-maser:<tag>

(see bioconductor-maser/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-maser/README.html)