recipe bioconductor-matrixgenerics

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MatrixGenerics.html

License:

Artistic-2.0

Recipe:

/bioconductor-matrixgenerics/meta.yaml

S4 generic functions modeled after the 'matrixStats' API for alternative matrix implementations. Packages with alternative matrix implementation can depend on this package and implement the generic functions that are defined here for a useful set of row and column summary statistics. Other package developers can import this package and handle a different matrix implementations without worrying about incompatibilities.

package bioconductor-matrixgenerics

Versions:

1.10.0-0,  1.6.0-0,  1.4.0-0,  1.2.1-0,  1.2.0-0,  1.0.0-1,  1.0.0-0

Depends:

• r-base >=4.2,<4.3.0a0

• r-matrixstats >=0.60.1

Required By:

• bioconductor-genomicfiles

• bioconductor-escape

• bioconductor-summarizedexperiment

• bioconductor-glmgampoi

• bioconductor-tloh

• bioconductor-lineagespot

• bioconductor-pdatk

• bioconductor-scone

• bioconductor-minimumdistance

• bioconductor-imcrtools

• bioconductor-transformgampoi

• bioconductor-miasim

• bioconductor-variantannotation

• bioconductor-tenxio

• bioconductor-scpca

• bioconductor-delayedarray

• bioconductor-vanillaice

• bioconductor-coregx

• bioconductor-sparsematrixstats

• bioconductor-raggedexperiment

• bioconductor-delayedmatrixstats

• bioconductor-crisprdesign

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-matrixgenerics

and update with:

conda update bioconductor-matrixgenerics

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-matrixgenerics:<tag>

(see bioconductor-matrixgenerics/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-matrixgenerics/README.html)