bioconductor-medips

downloads

MEDIPS was developed for analyzing data derived from methylated DNA immunoprecipitation (MeDIP) experiments followed by sequencing (MeDIP-seq). However, MEDIPS provides functionalities for the analysis of any kind of quantitative sequencing data (e.g. ChIP-seq, MBD-seq, CMS-seq and others) including calculation of differential coverage between groups of samples and saturation and correlation analysis.

Home http://bioconductor.org/packages/release/bioc/html/MEDIPS.html
Versions 1.24.0
License GPL (>=2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-medips

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-medips

and update with:

conda update bioconductor-medips

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-medips.