- recipe bioconductor-memes
motif matching, comparison, and de novo discovery using the MEME Suite
- Homepage:
- License:
MIT + file LICENSE
- Recipe:
A seamless interface to the MEME Suite family of tools for motif analysis. 'memes' provides data aware utilities for using GRanges objects as entrypoints to motif analysis, data structures for examining & editing motif lists, and novel data visualizations. 'memes' functions and data structures are amenable to both base R and tidyverse workflows.
- package bioconductor-memes¶
-
- Versions:
1.6.0-0
,1.2.0-0
,1.0.0-0
- Depends:
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-universalmotif
>=1.16.0,<1.17.0
r-base
>=4.2,<4.3.0a0
r-cmdfun
>=1.0.2
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-memes
and update with:
conda update bioconductor-memes
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-memes:<tag>
(see bioconductor-memes/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-memes/README.html)