- recipe bioconductor-metabcombiner
Method for Combining LC-MS Metabolomics Feature Measurements
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/metabCombiner.html
- License:
GPL-3
- Recipe:
This package aligns LC-HRMS metabolomics datasets acquired from biologically similar specimens analyzed under similar, but not necessarily identical, conditions. Peak-picked and simply aligned metabolomics feature tables (consisting of m/z, rt, and per-sample abundance measurements, plus optional identifiers & adduct annotations) are accepted as input. The package outputs a combined table of feature pair alignments, organized into groups of similar m/z, and ranked by a similarity score. Input tables are assumed to be acquired using similar (but not necessarily identical) analytical methods.
- package bioconductor-metabcombiner¶
-
- Versions:
1.8.0-0
,1.4.0-2
,1.4.0-1
,1.4.0-0
,1.2.0-0
,1.0.1-0
,1.0.0-1
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-metabcombiner
and update with:
conda update bioconductor-metabcombiner
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-metabcombiner:<tag>
(see bioconductor-metabcombiner/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-metabcombiner/README.html)