recipe bioconductor-metabocoreutils

Core Utils for Metabolomics Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MetaboCoreUtils.html

License:

Artistic-2.0

Recipe:

/bioconductor-metabocoreutils/meta.yaml

MetaboCoreUtils defines metabolomics-related core functionality provided as low-level functions to allow a data structure-independent usage across various R packages. This includes functions to calculate between ion (adduct) and compound mass-to-charge ratios and masses or functions to work with chemical formulas. The package provides also a set of adduct definitions and information on some commercially available internal standard mixes commonly used in MS experiments.

package bioconductor-metabocoreutils

Versions:

1.6.0-0,  1.2.0-0,  1.0.0-0

Depends:

• bioconductor-mscoreutils >=1.10.0,<1.11.0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-compounddb

• bioconductor-metaboannotation

• bioconductor-mobilitytransformr

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-metabocoreutils

and update with:

conda update bioconductor-metabocoreutils

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-metabocoreutils:<tag>

(see bioconductor-metabocoreutils/tags for valid values for <tag>)

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