recipe bioconductor-metabolomicsworkbenchr

Metabolomics Workbench in R

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/metabolomicsWorkbenchR.html

License:

GPL-3

Recipe:

/bioconductor-metabolomicsworkbenchr/meta.yaml

This package provides functions for interfacing with the Metabolomics Workbench RESTful API. Study, compound, protein and gene information can be searched for using the API. Methods to obtain study data in common Bioconductor formats such as SummarizedExperiment and MultiAssayExperiment are also included.

package bioconductor-metabolomicsworkbenchr

Versions:

1.4.0-0,  1.2.0-0,  1.0.0-2,  1.0.0-1

Depends:

• bioconductor-multiassayexperiment >=1.20.0,<1.21.0

• bioconductor-struct >=1.6.0,<1.7.0

• bioconductor-summarizedexperiment >=1.24.0,<1.25.0

• r-base >=4.1,<4.2.0a0

• r-data.table

• r-httr

• r-jsonlite

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-metabolomicsworkbenchr

and update with:

conda update bioconductor-metabolomicsworkbenchr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-metabolomicsworkbenchr:<tag>

(see bioconductor-metabolomicsworkbenchr/tags for valid values for <tag>)

Download stats

Link to this page

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