recipe bioconductor-metagene

This package produces metagene plots to compare the behavior of DNA-interacting proteins at selected groups of genes/features. Bam files are used to increase the resolution. Multiple combination of group of bam files and/or group of genomic regions can be compared in a single analysis. Bootstraping analysis is used to compare the groups and locate regions with statistically different enrichment profiles.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/metagene.html

License

Artistic-2.0 | file LICENSE

Recipe

/bioconductor-metagene/meta.yaml

package bioconductor-metagene

(downloads) docker_bioconductor-metagene

Versions

2.14.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-metagene

and update with:

conda update bioconductor-metagene

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-metagene:<tag>

(see bioconductor-metagene/tags for valid values for <tag>)