recipe bioconductor-metagenomeseq

metagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and under-sampling of microbial communities on disease association detection and the testing of feature correlations.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/metagenomeSeq.html

License

Artistic-2.0

Recipe

/bioconductor-metagenomeseq/meta.yaml

Links

biotools: metagenomeseq, doi: 10.1038/nmeth.2658

package bioconductor-metagenomeseq

(downloads) docker_bioconductor-metagenomeseq

Versions

1.26.2-0, 1.24.1-0, 1.24.0-0, 1.22.0-0, 1.20.0-0, 1.18.0-0, 1.16.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-metagenomeseq

and update with:

conda update bioconductor-metagenomeseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-metagenomeseq:<tag>

(see bioconductor-metagenomeseq/tags for valid values for <tag>)