-
recipe
bioconductor-metagxpancreas
Transcriptomic Pancreatic Cancer Datasets
- Homepage
https://bioconductor.org/packages/3.12/data/experiment/html/MetaGxPancreas.html
- License
Artistic-2.0
- Recipe
A collection of pancreatic Cancer transcriptomic datasets that are part of the MetaGxData package compendium. This package contains multiple pancreas cancer datasets that have been downloaded from various resources and turned into SummarizedExperiment objects. The details of how the authors normalized the data can be found in the experiment data section of the objects. Additionally, the location the data was obtained from can be found in the url variables of the experiment data portion of each SE.
-
package
bioconductor-metagxpancreas
¶ -
- Versions
1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.2.0-0
- Depends
bioconductor-annotationhub
>=2.22.0,<2.23.0
bioconductor-experimenthub
>=1.16.0,<1.17.0
bioconductor-impute
>=1.64.0,<1.65.0
bioconductor-s4vectors
>=0.28.0,<0.29.0
bioconductor-summarizedexperiment
>=1.20.0,<1.21.0
curl
>=7.71.1,<8.0a0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-metagxpancreas
and update with:
conda update bioconductor-metagxpancreas
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-metagxpancreas:<tag>
(see bioconductor-metagxpancreas/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-metagxpancreas/README.html)