- recipe bioconductor-methimpute
Imputation-guided re-construction of complete methylomes from WGBS data
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/methimpute.html
- License:
Artistic-2.0
- Recipe:
This package implements functions for calling methylation for all cytosines in the genome.
- package bioconductor-methimpute¶
-
- Versions:
1.20.0-0
,1.16.0-2
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.20.0-0
,1.16.0-2
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.4.1-0
,1.4.0-0
- Depends:
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
libstdcxx-ng
>=12
r-base
>=4.2,<4.3.0a0
r-rcpp
>=0.12.4.5
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-methimpute
and update with:
conda update bioconductor-methimpute
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-methimpute:<tag>
(see bioconductor-methimpute/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-methimpute/README.html)