recipe bioconductor-methinheritsim

Simulating Whole-Genome Inherited Bisulphite Sequencing Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/methInheritSim.html

License:

Artistic-2.0

Recipe:

/bioconductor-methinheritsim/meta.yaml

Simulate a multigeneration methylation case versus control experiment with inheritance relation using a real control dataset.

package bioconductor-methinheritsim

Versions:

1.20.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.4.1-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-methylkit >=1.24.0,<1.25.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

• r-msm

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-methinheritsim

and update with:

conda update bioconductor-methinheritsim

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-methinheritsim:<tag>

(see bioconductor-methinheritsim/tags for valid values for <tag>)

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