recipe bioconductor-mgfm

Marker Gene Finder in Microarray gene expression data

Homepage

https://bioconductor.org/packages/3.10/bioc/html/MGFM.html

License

GPL-3

Recipe

/bioconductor-mgfm/meta.yaml

Links

biotools: mgfm, doi: 10.1186/s12864-015-1785-9

The package is designed to detect marker genes from Microarray gene expression data sets

package bioconductor-mgfm

Versions

1.20.0-0, 1.18.0-1, 1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-0

Depends

• bioconductor-annotate >=1.64.0,<1.65.0

• bioconductor-annotationdbi >=1.48.0,<1.49.0

• r-base >=3.6,<3.7.0a0

Required By

• bioconductor-sampleclassifier

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mgfm

and update with:

conda update bioconductor-mgfm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mgfm:<tag>

(see bioconductor-mgfm/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mgfm/README.html)