recipe bioconductor-microbiome

Microbiome Analytics

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/microbiome.html

License:

BSD_2_clause + file LICENSE

Recipe:

/bioconductor-microbiome/meta.yaml

Utilities for microbiome analysis.

package bioconductor-microbiome

Versions:

1.20.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.4.2-0, 

1.20.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.4.2-0,  1.2.1-0,  1.0.2-0

Depends:

• bioconductor-biostrings >=2.66.0,<2.67.0

• bioconductor-phyloseq >=1.42.0,<1.43.0

• r-base >=4.2,<4.3.0a0

• r-compositions

• r-dplyr

• r-ggplot2

• r-reshape2

• r-rtsne

• r-scales

• r-tibble

• r-tidyr

• r-vegan

Required By:

• dadaist2

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-microbiome

and update with:

conda update bioconductor-microbiome

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-microbiome:<tag>

(see bioconductor-microbiome/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-microbiome/README.html)