- recipe bioconductor-microbiomedasim
Microbiome Differential Abundance Simulation
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/microbiomeDASim.html
- License
MIT + file LICENSE
- Recipe
A toolkit for simulating differential microbiome data designed for longitudinal analyses. Several functional forms may be specified for the mean trend. Observations are drawn from a multivariate normal model. The objective of this package is to be able to simulate data in order to accurately compare different longitudinal methods for differential abundance.
- package bioconductor-microbiomedasim¶
-
- Versions
1.8.0-0
,1.6.0-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
,1.0.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-metagenomeseq
>=1.36.0,<1.37.0
bioconductor-phyloseq
>=1.38.0,<1.39.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-microbiomedasim
and update with:
conda update bioconductor-microbiomedasim
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-microbiomedasim:<tag>
(see bioconductor-microbiomedasim/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-microbiomedasim/README.html)