recipe bioconductor-microbiomeprofiler

An R/shiny package for microbiome functional enrichment analysis

Homepage

https://bioconductor.org/packages/3.14/bioc/html/MicrobiomeProfiler.html

License

GPL-2

Recipe

/bioconductor-microbiomeprofiler/meta.yaml

This is an R/shiny package to perform functional enrichment analysis for microbiome data. This package was based on clusterProfiler. Moreover, MicrobiomeProfiler support KEGG enrichment analysis, COG enrichment analysis, Microbe-Disease association enrichment analysis, Metabo-Pathway analysis.

package bioconductor-microbiomeprofiler

(downloads) docker_bioconductor-microbiomeprofiler

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-microbiomeprofiler

and update with:

conda update bioconductor-microbiomeprofiler

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-microbiomeprofiler:<tag>

(see bioconductor-microbiomeprofiler/tags for valid values for <tag>)

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