recipe bioconductor-milor

Differential neighbourhood abundance testing on a graph

Homepage

https://bioconductor.org/packages/3.14/bioc/html/miloR.html

License

GPL-3 + file LICENSE

Recipe

/bioconductor-milor/meta.yaml

This package performs single-cell differential abundance testing. Cell states are modelled as representative neighbourhoods on a nearest neighbour graph. Hypothesis testing is performed using a negative bionomial generalized linear model.

package bioconductor-milor

(downloads) docker_bioconductor-milor

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-milor

and update with:

conda update bioconductor-milor

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-milor:<tag>

(see bioconductor-milor/tags for valid values for <tag>)

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