recipe bioconductor-minfidataepic

Example data for the Illumina Methylation EPIC array

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/minfiDataEPIC.html

License

Artistic-2.0

Recipe

/bioconductor-minfidataepic/meta.yaml

Data from 3 technical replicates of the cell line GM12878 from the EPIC methylation array.

package bioconductor-minfidataepic

Versions

1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0

Depends

• bioconductor-illuminahumanmethylationepicanno.ilm10b2.hg19 >=0.6.0,<0.7.0

• bioconductor-illuminahumanmethylationepicmanifest >=0.3.0,<0.4.0

• bioconductor-minfi >=1.38.0,<1.39.0

• curl >=7.77.0,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-minfidataepic

and update with:

conda update bioconductor-minfidataepic

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-minfidataepic:<tag>

(see bioconductor-minfidataepic/tags for valid values for <tag>)

Download stats

Link to this page

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